Gaelle 26/04/2016 : change ncl to take into account JPHEXT + create png files

diff --git a/MY_RUN/KTEST/001_2Drelief/005_ncl/plot_2Drelief.ncl b/MY_RUN/KTEST/001_2Drelief/005_ncl/plot_2Drelief.ncl
index c0df619..bb19ddb 100644 (file)
--- a/MY_RUN/KTEST/001_2Drelief/005_ncl/plot_2Drelief.ncl
+++ b/MY_RUN/KTEST/001_2Drelief/005_ncl/plot_2Drelief.ncl
@@ -14,31 +14,44 @@ begin
 ;==================================================;
 ; Open the workstation
 ;==================================================;
-  type = "x11"
+  type = "png"
   wks = gsn_open_wks(type,"visu_2Drelief")
 ;=================================================;
 ; lecture des différents champs
 ;=================================================;
-zs  = fichier1->ZS(0,:) ; ZS
-zhat  = fichier1->ZHAT(:) ; ZHAT
-xhat  = fichier1->XHAT(:) ; XHAT
-lsum1_old = fichier1->LSUM(:,0,:) ; LSUM
-lsthm1 = fichier1->LSTHM(:,0,:) ; LSTHM
+  jphext  = fichier1->JPHEXT
+  mdims = getfilevardimsizes(fichier1,"UT") 
+  nd = dimsizes(mdims)
+  imax=mdims(nd-1)-2*jphext
+  jmax=mdims(nd-2)-2*jphext
+  kmax=mdims(nd-3)-2
+
+
+zs  = fichier1->ZS(0,jphext:imax+jphext-1) ; ZS
+zhat  = fichier1->ZHAT(1:kmax+1) ; ZHAT
+xhat  = fichier1->XHAT(jphext:imax+jphext-1+1) ; XHAT
+
+lsthm1 = fichier1->LSTHM(1:kmax,0,jphext:imax+jphext-1) ; LSTHM
 lsthm1@long_name="LSTHM"
 lsthm1@units="K"
 
-wt1_old= fichier1->WT(:,0,:) ; WT
-ut1_old= fichier1->UT(:,0,:) ; UT
-tht1= fichier1->THT(:,0,:) ; THT
+lsum1_old = fichier1->LSUM(1:kmax,0,jphext:imax+jphext-1+1) ; LSUM
+wt1_old= fichier1->WT(1:kmax+1,0,jphext:imax+jphext-1) ; WT
+ut1_old= fichier1->UT(1:kmax,0,jphext:imax+jphext-1+1) ; UT
+
+tht1= fichier1->THT(1:kmax,0,jphext:imax+jphext-1) ; THT
 tht1@long_name="Potential Temperature"
 tht1@units="K"
-rvt1= fichier1->RVT(:,0,:) ; RVT
+
+rvt1= fichier1->RVT(1:kmax,0,jphext:imax+jphext-1) ; RVT
 rvt1@long_name="Vapor mixing ratio"
 rvt1@units="g/kg"
-cflu1= fichier1->CFLU(:,0,:) ; CFLU
+
+cflu1= fichier1->CFLU(1:kmax,0,jphext:imax+jphext-1) ; CFLU
 cflu1@long_name="CFLU"
 cflu1@units="-"
-cflw1= fichier1->CFLW(:,0,:) ; CFLW
+
+cflw1= fichier1->CFLW(1:kmax,0,jphext:imax+jphext-1) ; CFLW
 cflw1@long_name="CFLW"
 cflw1@units=" "
 
@@ -47,34 +60,31 @@ SS1=fichier1->DTCUR__TIME
 YYYYDDMM2= fichier2->DTCUR__TDATE
 SS2=fichier2->DTCUR__TIME
 
-lsum2_old = fichier2->LSUM(:,0,:) ; LSUM
-lsthm2 = fichier2->LSTHM(:,0,:) ; LSTHM
+lsthm2 = fichier2->LSTHM(1:kmax,0,jphext:imax+jphext-1) ; LSTHM
 lsthm2@long_name="LSTHM"
 lsthm2@units="K"
-wt2_old= fichier2->WT(:,0,:) ; WT
-ut2_old= fichier2->UT(:,0,:) ; UT
-tht2= fichier2->THT(:,0,:) ; THT
+
+lsum2_old = fichier2->LSUM(1:kmax,0,jphext:imax+jphext-1+1) ; LSUM
+wt2_old= fichier2->WT(1:kmax+1,0,jphext:imax+jphext-1) ; WT
+ut2_old= fichier2->UT(1:kmax,0,jphext:imax+jphext-1+1) ; UT
+
+tht2= fichier2->THT(1:kmax,0,jphext:imax+jphext-1) ; THT
 tht2@long_name="Potential Temperature"
 tht2@units="K"
-rvt2= fichier2->RVT(:,0,:) ; RVT
+
+rvt2= fichier2->RVT(1:kmax,0,jphext:imax+jphext-1) ; RVT
 rvt2@long_name="Vapor mixing ratio"
 rvt2@units="g/kg"
-cflu2= fichier2->CFLU(:,0,:) ; CFLU
+
+cflu2= fichier2->CFLU(1:kmax,0,jphext:imax+jphext-1) ; CFLU
 cflu2@long_name="CFLU"
 cflu2@units="-"
-cflw2= fichier2->CFLW(:,0,:) ; CFLW
+
+cflw2= fichier2->CFLW(1:kmax,0,jphext:imax+jphext-1) ; CFLW
 cflw2@long_name="CFLW"
 cflw2@units=" "
 
 ;=================================================;
-; Récupération des dimensions des tableaux 
-;=================================================;
-  mdims = dimsizes(tht1)
-  print (mdims)
-  nd=dimsizes(mdims)
-  imax=mdims(nd-1)
-  kmax=mdims(nd-2)
-;=================================================;
 ; Récupération de la date 
 ;=================================================;
 year1=YYYYDDMM1(0)
@@ -96,8 +106,6 @@ lsum1@units="m/s"
 ut1 = wrf_user_unstagger(ut1_old,"X")
 ut1@long_name="Zonal wind"
 ut1@units="m/s"
-printVarSummary(ut1_old)
-printVarSummary(ut1)
 
 lsum2 = wrf_user_unstagger(lsum1_old,"X")
 lsum2@long_name="LSUM"
@@ -141,12 +149,7 @@ wt2@units="m/s"
        z(:,i) = nzh*zcoef(i)+zs(i)
     end do
 
-   printVarSummary(ut1)
-   printVarSummary(z)
-   printVarSummary(xhat)
-
-   xconf=conform(tht1,xhat,1)
-   printVarSummary(xconf)
+   xconf=conform(tht1,xhat(0:imax-1),1)
 ;=================================================;
 ; Set some other basic resources
 ;=================================================;
@@ -165,7 +168,6 @@ wt2@units="m/s"
   resmap@sfXArray        = xconf             ; 2D                  
   resmap@trGridType            = "TriangularMesh"
   
-;  resmap@cnInfoLabelOn   = False               ; turn off contour info label
 
 resmap@tiXAxisPosition="Left"
 resmap@tiXAxisFontHeightF=0.015
@@ -246,6 +248,7 @@ opts@tiXAxisString="time="+time1+"s"
 plot_cflu1 = gsn_csm_contour(wks,cflu1,opts)
 draw(plot_cflu1)
 frame(wks)
+
 opts@tiXAxisString="time="+time2+"s"
 plot_cflu2 = gsn_csm_contour(wks,cflu2,opts)
 draw(plot_cflu2)
@@ -303,14 +306,14 @@ res_t@xyExplicitLegendLabels = (/"THT-LSTHM"/)
 res_t@gsnLeftString      = "THT-LSTHM"          ; title
 res_t@gsnLeftStringFontHeightF = 0.015
 
-plot  = gsn_csm_x2y (wks,wt1(:,128),tht1(:,128)-lsthm1(:,128),z(:,128),res_w,res_t)            
+plot  = gsn_csm_x2y (wks,wt1(:,127),tht1(:,127)-lsthm1(:,127),z(:,127),res_w,res_t)            
 draw(plot)
 frame(wks)
 
 res_t@trXMinF=-1
 res_t@trXMaxF=0.2
 res_w@gsnRightString="time="+time2+"s"
-plot  = gsn_csm_x2y (wks,wt2(:,128),tht2(:,128)-lsthm2(:,128),z(:,128),res_w,res_t)            
+plot  = gsn_csm_x2y (wks,wt2(:,127),tht2(:,127)-lsthm2(:,127),z(:,127),res_w,res_t)            
 draw(plot)
 frame(wks)
 
@@ -328,14 +331,14 @@ res_lsu@gsnLeftString      = "UT-LSUM"          ; title
 res_lsu@tiMainFontHeightF = 0.015
 res_w@gsnRightString="time="+time1+"s"
 
-plot  = gsn_csm_x2y (wks,wt1(:,128),ut1(:,128)-lsum1(:,128),z(:,128),res_w,res_lsu)            
+plot  = gsn_csm_x2y (wks,wt1(:,127),ut1(:,127)-lsum1(:,127),z(:,127),res_w,res_lsu)            
 draw(plot)
 frame(wks)
 res_lsu@trXMinF=-2
 res_lsu@trXMaxF=2
 res_w@gsnRightString="time="+time2+"s"
 
-plot  = gsn_csm_x2y (wks,wt2(:,128),ut2(:,128)-lsum2(:,128),z(:,128),res_w,res_lsu)            
+plot  = gsn_csm_x2y (wks,wt2(:,127),ut2(:,127)-lsum2(:,127),z(:,127),res_w,res_lsu)            
 draw(plot)
 frame(wks)
 

diff --git a/MY_RUN/KTEST/001_2Drelief/005_ncl/run_ncl b/MY_RUN/KTEST/001_2Drelief/005_ncl/run_ncl
index 7a4ab0f..067d602 100755 (executable)
--- a/MY_RUN/KTEST/001_2Drelief/005_ncl/run_ncl
+++ b/MY_RUN/KTEST/001_2Drelief/005_ncl/run_ncl
@@ -8,3 +8,19 @@ ln -sf ../002_mesonh/EXPER.1.HYD2D.002.nc4 .
 ln -sf ../002_mesonh/EXPER.1.HYD2D.003.nc4 .
 
 ncl  plot_2Drelief.ncl
+display visu_2Drelief.000001.png
+display visu_2Drelief.000002.png
+display visu_2Drelief.000003.png
+display visu_2Drelief.000004.png
+display visu_2Drelief.000005.png
+display visu_2Drelief.000006.png
+display visu_2Drelief.000007.png
+display visu_2Drelief.000008.png
+display visu_2Drelief.000009.png
+display visu_2Drelief.000010.png
+display visu_2Drelief.000011.png
+display visu_2Drelief.000012.png
+display visu_2Drelief.000013.png
+display visu_2Drelief.000014.png
+display visu_2Drelief.000015.png
+display visu_2Drelief.000016.png

diff --git a/MY_RUN/KTEST/002_3Drelief/005_ncl/plot_3Drelief.ncl b/MY_RUN/KTEST/002_3Drelief/005_ncl/plot_3Drelief.ncl
index 574c95e..e0b3458 100644 (file)
--- a/MY_RUN/KTEST/002_3Drelief/005_ncl/plot_3Drelief.ncl
+++ b/MY_RUN/KTEST/002_3Drelief/005_ncl/plot_3Drelief.ncl
@@ -13,28 +13,25 @@
 ;==================================================;
 ; Open the workstation
 ;==================================================;
-  type = "x11"
+  type = "png"
   wks = gsn_open_wks(type,"visu_3Drelief")
 ;=================================================;
 ; lecture des différents champs
 ;=================================================;
-  zs  = fichier1->ZS(0,:) ; ZS
-  zhat  = fichier1->ZHAT(:) ; ZHAT
-  xhat  = fichier1->XHAT(:) ; XHAT
+  jphext  = fichier1->JPHEXT
+  mdims = getfilevardimsizes(fichier1,"UT") 
+  nd = dimsizes(mdims)
+  imax=mdims(nd-1)-2*jphext
+  jmax=mdims(nd-2)-2*jphext
+  kmax=mdims(nd-3)-2
 
-  ut= fichier1->UT(:,:,:) ; UT
+
+
+  ut= fichier1->UT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1+1) ; UT
   ut@long_name="Zonal wind"
   ut@units="m/s"
 
 
-;=================================================;
-; Récupération des dimensions des tableaux 
-;=================================================;
-  mdims = dimsizes(ut)
-  nd=dimsizes(mdims)
-  imax=mdims(nd-1)
-  jmax=mdims(nd-2)
-  kmax=mdims(nd-3)
 
 ;=================================================;
 ; Unstagger U
@@ -66,7 +63,7 @@
   resmap@cnLevelSpacingF    = 0.25
   resmap@cnMinLevelValF    = 8
   resmap@cnMaxLevelValF    = 14
-  plot_ut = gsn_csm_contour(wks,u(1,:,1:),resmap)
+  plot_ut = gsn_csm_contour(wks,u(0,:,:),resmap)
   draw(plot_ut)
   frame(wks)
 

diff --git a/MY_RUN/KTEST/002_3Drelief/005_ncl/run_ncl b/MY_RUN/KTEST/002_3Drelief/005_ncl/run_ncl
index b901502..8fe4534 100755 (executable)
--- a/MY_RUN/KTEST/002_3Drelief/005_ncl/run_ncl
+++ b/MY_RUN/KTEST/002_3Drelief/005_ncl/run_ncl
@@ -7,3 +7,4 @@ set -e
 ln -sf ../002_mesonh/REL3D.1.EXP01.002.nc4 .
 
 ncl  plot_3Drelief.ncl
+display visu_3Drelief.png

diff --git a/MY_RUN/KTEST/003_KW78/005_ncl/plot_KW78.ncl b/MY_RUN/KTEST/003_KW78/005_ncl/plot_KW78.ncl
index 6f66a2e..fc9f5f3 100644 (file)
--- a/MY_RUN/KTEST/003_KW78/005_ncl/plot_KW78.ncl
+++ b/MY_RUN/KTEST/003_KW78/005_ncl/plot_KW78.ncl
@@ -13,56 +13,58 @@
 ;==================================================;
 ; Open the workstation
 ;==================================================;
-  type = "x11"
+  type = "png"
   wks = gsn_open_wks(type,"visu_KW78")
 ;=================================================;
 ; Get informations on variable sizes
 ; dims are dims-2 to remove non-physical values
 ;=================================================;
-  mdims = getfilevardimsizes(fichier1,"UM") ; get dimension sizes
+  jphext  = fichier1->JPHEXT
+  mdims = getfilevardimsizes(fichier1,"UT") 
   nd = dimsizes(mdims)
-  imax=mdims(nd-1)-2
-  jmax=mdims(nd-2)-2
+  imax=mdims(nd-1)-2*jphext
+  jmax=mdims(nd-2)-2*jphext
   kmax=mdims(nd-3)-2
+
+
 ;=================================================;
 ; lecture des différents champs
 ;=================================================;
-  zs  = fichier1->ZS(1:jmax,1:imax) ; ZS
+  zs  = fichier1->ZS(jphext:jmax+jphext-1,jphext:imax+jphext-1) ; ZS
   zhat  = fichier1->ZHAT(1:kmax+1) ; ZHAT
-  yhat  = fichier1->YHAT(1:jmax+1) ; YHAT
-  xhat  = fichier1->XHAT(1:imax+1) ; XHAT
+  yhat  = fichier1->YHAT(1:jmax+jphext-1+1) ; YHAT
+  xhat  = fichier1->XHAT(1:imax+jphext-1+1) ; XHAT
 
-  wt= fichier1->WT(1:kmax+1,1:jmax,1:imax) ; WT
-  vt= fichier1->VT(1:kmax,1:jmax+1,1:imax) ; VT
-  ut= fichier1->UT(1:kmax,1:jmax,1:imax+1) ; UT
-  tht1= fichier1->THT(1:kmax,1:jmax,1:imax) ; THT
+  wt= fichier1->WT(1:kmax+1,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; WT
+  vt= fichier1->VT(1:kmax,jphext:jmax+jphext-1+1,jphext:imax+jphext-1) ; VT
+  ut= fichier1->UT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1+1) ; UT
+  tht1= fichier1->THT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; THT
   tht1@long_name="Potential Temperature"
   tht1@units="K"
-  lsthm1= fichier1->LSTHM(1:kmax,1:jmax,1:imax) 
+  lsthm1= fichier1->LSTHM(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) 
   lsthm1@long_name="Large SCale Potential Temperature"
   lsthm1@units="K"
 
-  pabst1= fichier1->PABST(1:kmax,1:jmax,1:imax) ; PABST
+  pabst1= fichier1->PABST(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; PABST
   pabst1@long_name="Pressure"
   pabst1@units="Pa"
-  rvt1= fichier1->RVT(1:kmax,1:jmax,1:imax) ; RVT
+  rvt1= fichier1->RVT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; RVT
   rvt1@long_name="Vapor mixing ratio"
   rvt1@units="kg/kg"
-  rct1= fichier1->RCT(1:kmax,1:jmax,1:imax) ; RCT
+  rct1= fichier1->RCT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; RCT
   rct1@long_name="Cloud mixing ratio"
   rct1@units="kg/kg"
-  rrt1= fichier1->RRT(1:kmax,1:jmax,1:imax) ; RRT
+  rrt1= fichier1->RRT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; RRT
   rrt1@long_name="Rain mixing ratio"
   rrt1@units="kg/kg"
 
-  inprr= fichier1->INPRR(1:jmax,1:imax) 
+  inprr= fichier1->INPRR(jphext:jmax+jphext-1,jphext:imax+jphext-1) 
   inprr@long_name="Instantaneous Precipitation Rain Rate"
   inprr@units="mm/h"
-  acprr= fichier1->ACPRR(1:jmax,1:imax) 
+  acprr= fichier1->ACPRR(jphext:jmax+jphext-1,jphext:imax+jphext-1) 
   acprr@long_name="Accumulated Precipitation Rain Rate"
   acprr@units="mm"
 
-
   YYYYDDMM1= fichier1->DTCUR__TDATE
   SS1=fichier1->DTCUR__TIME
 

diff --git a/MY_RUN/KTEST/003_KW78/005_ncl/run_ncl b/MY_RUN/KTEST/003_KW78/005_ncl/run_ncl
index 59c12f7..89c62b8 100755 (executable)
--- a/MY_RUN/KTEST/003_KW78/005_ncl/run_ncl
+++ b/MY_RUN/KTEST/003_KW78/005_ncl/run_ncl
@@ -7,3 +7,17 @@ set -e
 ln -sf ../002_mesonh/KWRAI.1.SEG01.004.nc4 .
 
 ncl  plot_KW78.ncl
+display visu_KW78.000001.png
+display visu_KW78.000002.png
+display visu_KW78.000003.png
+display visu_KW78.000004.png
+display visu_KW78.000005.png
+display visu_KW78.000006.png
+display visu_KW78.000007.png
+display visu_KW78.000008.png
+display visu_KW78.000009.png
+display visu_KW78.000010.png
+display visu_KW78.000011.png
+display visu_KW78.000012.png
+display visu_KW78.000013.png
+

diff --git a/MY_RUN/KTEST/004_Reunion/005_ncl_nc4/MESONHtools.ncl b/MY_RUN/KTEST/004_Reunion/005_ncl_nc4/MESONHtools.ncl
index 6f810bb..7280ddc 100644 (file)
--- a/MY_RUN/KTEST/004_Reunion/005_ncl_nc4/MESONHtools.ncl
+++ b/MY_RUN/KTEST/004_Reunion/005_ncl_nc4/MESONHtools.ncl
@@ -59,8 +59,9 @@ if(isfilevar(in_file,"RPK")) then
    if(isfilevar(in_file,"IMAX"))\r
        XHAT=in_file->XHAT\r
        YHAT=in_file->YHAT\r
-       IMAX= dimsizes(XHAT)-2\r
-       JMAX= dimsizes(YHAT)-2\r
+       jphext  = in_file->JPHEXT\r
+       IMAX= dimsizes(XHAT)-2*JPHEXT\r
+       JMAX= dimsizes(YHAT)-2*JPHEXT\r
        zdx=XHAT(2)-XHAT(1)\r
        zdy=YHAT(2)-YHAT(1)\r
 \r

diff --git a/MY_RUN/KTEST/004_Reunion/005_ncl_nc4/mnh_BasicMap.ncl b/MY_RUN/KTEST/004_Reunion/005_ncl_nc4/mnh_BasicMap.ncl
index c8f4b66..304529d 100644 (file)
--- a/MY_RUN/KTEST/004_Reunion/005_ncl_nc4/mnh_BasicMap.ncl
+++ b/MY_RUN/KTEST/004_Reunion/005_ncl_nc4/mnh_BasicMap.ncl
@@ -19,10 +19,11 @@ begin
 ; Get information on variable sizes
 ;=================================================;
 
+  jphext  = a->JPHEXT
   mdims = getfilevardimsizes(a,"ZS") ; get some dimension sizes for the file
   nd = dimsizes(mdims)
-  imax=mdims(nd-1)-2  ; -2 : to remove non-physical values
-  jmax=mdims(nd-2)-2  ; -2 : to remove non-physical values
+  imax=mdims(nd-1)-2*jphext  ; -2*jphext : to remove non-physical values
+  jmax=mdims(nd-2)-2*jphext  ; -2*jphext : to remove non-physical values
 
 ;=================================================;
 ; Read the variables 
@@ -31,10 +32,10 @@ begin
 ; Note: do not read first and last value which are non physical values
 ; -------------------------------------
 
-  lat2d=a->LAT(1:jmax,1:imax)
-  lon2d=a->LON(1:jmax,1:imax)
+  lat2d=a->LAT(jphext:jmax+jphext-1,jphext:imax+jphext-1)
+  lon2d=a->LON(jphext:jmax+jphext-1,jphext:imax+jphext-1)
 
-  ZS = a->ZS(1:jmax,1:imax)
+  ZS = a->ZS(jphext:jmax+jphext-1,jphext:imax+jphext-1)
   ZS@long_name="Orography"
   ZS@units="m"
 

diff --git a/MY_RUN/KTEST/004_Reunion/005_ncl_nc4/mnh_Cloud.ncl b/MY_RUN/KTEST/004_Reunion/005_ncl_nc4/mnh_Cloud.ncl
index ac7a1e4..c6ad402 100644 (file)
--- a/MY_RUN/KTEST/004_Reunion/005_ncl_nc4/mnh_Cloud.ncl
+++ b/MY_RUN/KTEST/004_Reunion/005_ncl_nc4/mnh_Cloud.ncl
@@ -28,11 +28,11 @@ begin
 ;=================================================;
 ; Get informations on variable sizes
 ;=================================================;
-
+  jphext  = a->JPHEXT
   mdims = getfilevardimsizes(a,"UT") ; get some dimension sizes for the file
   nd = dimsizes(mdims)
-  imax=mdims(nd-1)-2
-  jmax=mdims(nd-2)-2
+  imax=mdims(nd-1)-2*jphext
+  jmax=mdims(nd-2)-2*jphext
   kmax=mdims(nd-3)-2
 ; -2 : to remove non-physical values
 
@@ -42,15 +42,15 @@ begin
 
 ; Read latitude and longitude fields
 ; -----------------------------------------
-  lat2d = a->LAT(1:jmax,1:imax)
+  lat2d = a->LAT(jphext:jmax+jphext-1,jphext:imax+jphext-1)
   lat2d@units="degrees_north"
-  lon2d = a->LON(1:jmax,1:imax)
+  lon2d = a->LON(jphext:jmax+jphext-1,jphext:imax+jphext-1)
   lon2d@units="degrees_east"
 
 ; Read water wapor mixing ratio if it exists
 ; -----------------------------------------
     if(isfilevar(a,"RVT"))
-      qv = a->RVT(1:kmax,1:jmax,1:imax)
+      qv = a->RVT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)
       qv = qv*1000.
       qv@units = "g/kg"   
       qv@description="Water vapor mixing ratio"
@@ -61,7 +61,7 @@ begin
 ; Read cloud mixing ratio if it exists
 ; -----------------------------------------
     if(isfilevar(a,"RCT"))
-      qc = a->RCT(1:kmax,1:jmax,1:imax)
+      qc = a->RCT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)
       qc = qc*1000.
       qc@units = "g/kg"   
       qc@description="Cloud mixing ratio"
@@ -72,7 +72,7 @@ begin
 ; Read rain mixing ratio if it exists
 ; -----------------------------------------
     if(isfilevar(a,"RRT"))
-      qr = a->RRT(1:kmax,1:jmax,1:imax)
+      qr = a->RRT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)
       qr = qr*1000.
       qr@units = "g/kg"   
       qr@description="Rain mixing ratio"
@@ -83,7 +83,7 @@ begin
 ; Read ice mixing ratio if it exists
 ; -----------------------------------------
     if(isfilevar(a,"RIT"))
-      qi = a->RIT(1:kmax,1:jmax,1:imax)
+      qi = a->RIT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)
       qi = qi*1000.
       qi@units = "g/kg"   
       qi@description="Ice mixing ratio"

diff --git a/MY_RUN/KTEST/004_Reunion/005_ncl_nc4/mnh_CrossSection.ncl b/MY_RUN/KTEST/004_Reunion/005_ncl_nc4/mnh_CrossSection.ncl
index 938c64d..718c007 100644 (file)
--- a/MY_RUN/KTEST/004_Reunion/005_ncl_nc4/mnh_CrossSection.ncl
+++ b/MY_RUN/KTEST/004_Reunion/005_ncl_nc4/mnh_CrossSection.ncl
@@ -1,5 +1,7 @@
 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl"
 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_csm.ncl"
+load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/contributed.ncl"
+load "$NCARG_ROOT/lib/ncarg/nclscripts/wrf/WRFUserARW.ncl"
 load "MESONHtools.ncl"
 
 begin
@@ -15,9 +17,7 @@ begin
 ; For paper quality plot do not use ncgm or eps
 ;=================================================;
   type = "x11"
-;  type = "png"
-; type = "pdf"
-; type = "ps"
+
 
 ;=================================================;
 ; Open the workstation and choose colormap
@@ -28,29 +28,30 @@ begin
 ;=================================================;
 ; Get informations on variable sizes
 ;=================================================;
+  jphext  = a->JPHEXT
   mdims = getfilevardimsizes(a,"UT") ; get some dimension sizes for the file
   nd = dimsizes(mdims)
-  imax=mdims(nd-1)-2
-  jmax=mdims(nd-2)-2
+  imax=mdims(nd-1)-2*jphext
+  jmax=mdims(nd-2)-2*jphext
   kmax=mdims(nd-3)-2
 
 ;=================================================;
 ; Read  some variables from mnh_file
 ;=================================================;
-    ZS =a->ZS(1:jmax,1:imax)              
+    ZS =a->ZS(jphext:jmax+jphext-1,jphext:imax+jphext-1)              
 
-    th = a->THT(1:kmax,1:jmax,1:imax)
+    th = a->THT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)
     th@long_name="Potential Temperature"
     th@description="TH"
 
-    um = a->UT(1:kmax,1:jmax,1:imax+1)
+    um = a->UT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1+1)
     um@description="U"
 
     zh= a->ZHAT(0:kmax)
 
-    lat2d = a->LAT(1:jmax,1:imax)
+    lat2d = a->LAT(jphext:jmax+jphext-1,jphext:imax+jphext-1)
     lat2d@units="degrees_north"
-    lon2d = a->LON(1:jmax,1:imax)
+    lon2d = a->LON(jphext:jmax+jphext-1,jphext:imax+jphext-1)
     lon2d@units="degrees_east"
 
     ZS@lat2d=lat2d
@@ -158,7 +159,7 @@ begin
 ; Define the plane where the cross-section will be done
 ; ------------------------------------------------------
         plane = new(2,float)
-        plane = (/ (mdims(nd-1)-2)/2, (mdims(nd-2)-2)/2 /)    ; pivot point is center of domain (x,y)
+        plane = (/ (imax)/2, (jmax)/2 /)    ; pivot point is center of domain (x,y)
 
 ; Resource for the interpolation
 ; --------------------------------

diff --git a/MY_RUN/KTEST/004_Reunion/005_ncl_nc4/mnh_ModelLevels.ncl b/MY_RUN/KTEST/004_Reunion/005_ncl_nc4/mnh_ModelLevels.ncl
index 49640ea..412300c 100644 (file)
--- a/MY_RUN/KTEST/004_Reunion/005_ncl_nc4/mnh_ModelLevels.ncl
+++ b/MY_RUN/KTEST/004_Reunion/005_ncl_nc4/mnh_ModelLevels.ncl
@@ -1,4 +1,6 @@
 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl"
+load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/contributed.ncl"
+load "$NCARG_ROOT/lib/ncarg/nclscripts/wrf/WRFUserARW.ncl"
 load "MESONHtools.ncl"
 
 ;=============================================================;
@@ -29,40 +31,41 @@ begin
 ; Get informations on variable sizes
 ; dims are dims-2 to remove non-physical values
 ;=================================================;
+  jphext  = a->JPHEXT
   mdims = getfilevardimsizes(a,"THT") ; get dimension sizes
   nd = dimsizes(mdims)
-  imax=mdims(nd-1)-2
-  jmax=mdims(nd-2)-2
+  imax=mdims(nd-1)-2*jphext
+  jmax=mdims(nd-2)-2*jphext
   kmax=mdims(nd-3)-2
 
 ;=================================================;
 ; Read the variables we need
 ;=================================================;
-  lat2d = a->LAT(1:jmax,1:imax)
+  lat2d = a->LAT(jphext:jmax+jphext-1,jphext:imax+jphext-1)
   lat2d@units="degrees_north"
-  lon2d = a->LON(1:jmax,1:imax)
+  lon2d = a->LON(jphext:jmax+jphext-1,jphext:imax+jphext-1)
   lon2d@units="degrees_east"
 
-  th  = a->THT(1:kmax,1:jmax,1:imax)   ; theta
+  th  = a->THT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)   ; theta
   th@long_name="Potential Temperature"
   th@units = "K"
   th@lat2d=lat2d
   th@lon2d=lon2d
 
-  qv  = a->RVT(1:kmax,1:jmax,1:imax)   ; Qv
+  qv  = a->RVT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)   ; Qv
   qv = qv*1000.
   qv@long_name="Water vapor mixing ratio"
   qv@units = "g/kg"
   qv@lat2d=lat2d
   qv@lon2d=lon2d
 
-  ut   = a->UT(1:kmax,1:jmax,1:imax+1)        ; u
+  ut   = a->UT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1+1)        ; u
   ut@long_name="U"
   ut@units="m/s"
   ut@lat2d=lat2d
   ut@lon2d=lon2d
 
-  vt   = a->VT(1:kmax,1:jmax+1,1:imax)        ; v
+  vt   = a->VT(1:kmax,jphext:jmax+jphext-1+1,jphext:imax+jphext-1)        ; v
   vt@long_name="V"
   vt@units="m/s"
   vt@lat2d=lat2d

diff --git a/MY_RUN/KTEST/004_Reunion/005_ncl_nc4/mnh_PressureLevel.ncl b/MY_RUN/KTEST/004_Reunion/005_ncl_nc4/mnh_PressureLevel.ncl
index a992ef2..0bfe503 100644 (file)
--- a/MY_RUN/KTEST/004_Reunion/005_ncl_nc4/mnh_PressureLevel.ncl
+++ b/MY_RUN/KTEST/004_Reunion/005_ncl_nc4/mnh_PressureLevel.ncl
@@ -1,5 +1,7 @@
 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl"
 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_csm.ncl"
+load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/contributed.ncl"
+load "$NCARG_ROOT/lib/ncarg/nclscripts/wrf/WRFUserARW.ncl"
 load "MESONHtools.ncl"
 
 ;=================================================;
@@ -38,10 +40,11 @@ begin
 ; dims are dims-2 to remove non-physical values
 ;=================================================;
   print("Reading dims")
+  jphext  = a->JPHEXT
   mdims = getfilevardimsizes(a,"UT") ; get dimension sizes
   nd = dimsizes(mdims)
-  imax=mdims(nd-1)-2
-  jmax=mdims(nd-2)-2
+  imax=mdims(nd-1)-2*jphext
+  jmax=mdims(nd-2)-2*jphext
   kmax=mdims(nd-3)-2
 
 
@@ -50,12 +53,12 @@ begin
 ;=================================================;
 
   print("Reading THT")
-  tk = a->THT(1:kmax,1:jmax,1:imax)         ; potential temperature
+  tk = a->THT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)             ; potential temperature
   tk@description="Potential Temperature"
 
   print("Reading wind")
-  u = a->UT(1:kmax,1:jmax,1:imax+1)         ; u
-  v = a->VT(1:kmax,1:jmax+1,1:imax)         ; v
+  u = a->UT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1+1)         ; u
+  v = a->VT(1:kmax,jphext:jmax+jphext-1+1,jphext:imax+jphext-1)         ; v
 
 ; Unstagger u,v
   u!0="Z"
@@ -69,16 +72,16 @@ begin
   v_unst = wrf_user_unstagger(v,"Y")
 
   print("Reading pressure")
-  p = a->PABST(1:kmax,1:jmax,1:imax)        ; pressure
+  p = a->PABST(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)        ; pressure
   p@description="Pressure"
 
   print("Reading water vapor mixing ratio")
-  rv = a->RVT(1:kmax,1:jmax,1:imax)    ; water vapor mixing ratio
+  rv = a->RVT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)    ; water vapor mixing ratio
   rv = rv*1000.    ; water vapor mixing ratio
   rv@description="Water vapor mixing ratio"
 
   print("Reading orography")
-  zs = a->ZS(1:jmax,1:imax)                ; terrain
+  zs = a->ZS(jphext:jmax+jphext-1,jphext:imax+jphext-1)                    ; terrain
   zh = a->ZHAT(1:kmax+1)                   ; heigth without terrain
 
  print("End of variables reading")

diff --git a/MY_RUN/KTEST/004_Reunion/006_ncl/plot_Reunion.ncl b/MY_RUN/KTEST/004_Reunion/006_ncl/plot_Reunion.ncl
index b3bcb00..b101f27 100644 (file)
--- a/MY_RUN/KTEST/004_Reunion/006_ncl/plot_Reunion.ncl
+++ b/MY_RUN/KTEST/004_Reunion/006_ncl/plot_Reunion.ncl
@@ -13,23 +13,25 @@ load "$NCARG_ROOT/lib/ncarg/nclscripts/wrf/WRFUserARW.ncl"
 ;==================================================;
 ; Open the workstation
 ;==================================================;
-  ; type = "ps"
-   type = "x11"
+   type = "png"
   wks = gsn_open_wks(type,"visu_Reunion")
 ;=================================================;
 ; Get informations on variable sizes
 ; dims are dims-2 to remove non-physical values
 ;=================================================;
-  mdims = getfilevardimsizes(fichier1,"UT") ; get dimension sizes
+  jphext  = fichier1->JPHEXT
+  mdims = getfilevardimsizes(fichier1,"UT") 
   nd = dimsizes(mdims)
-  imax=mdims(nd-1)-2
-  jmax=mdims(nd-2)-2
+  imax=mdims(nd-1)-2*jphext
+  jmax=mdims(nd-2)-2*jphext
   kmax=mdims(nd-3)-2
+
+
 ;=================================================;
 ; Set map projection
 ;=================================================;
-  lat2d=fichier1->LAT(1:jmax,1:imax)
-  lon2d=fichier1->LON(1:jmax,1:imax)
+  lat2d=fichier1->LAT(jphext:jmax+jphext-1,jphext:imax+jphext-1)
+  lon2d=fichier1->LON(jphext:jmax+jphext-1,jphext:imax+jphext-1)
 
 ; Resources for the map projection
 ;-----------------------------------------------;
@@ -96,32 +98,32 @@ load "$NCARG_ROOT/lib/ncarg/nclscripts/wrf/WRFUserARW.ncl"
 ;=================================================;
 ; lecture des différents champs
 ;=================================================;
-  zs  = fichier1->ZS(1:jmax,1:imax) ; ZS
+  zs  = fichier1->ZS(jphext:jmax+jphext-1,jphext:imax+jphext-1) ; ZS
   zs@lat2d = lat2d
   zs@lon2d = lon2d
 
-  wt= fichier1->WT(1:kmax+1,1:jmax,1:imax) ; WT
-  vt= fichier1->VT(1:kmax,1:jmax+1,1:imax) ; VT
-  ut= fichier1->UT(1:kmax,1:jmax,1:imax+1) ; UT
-  tht= fichier1->THT(1:kmax,1:jmax,1:imax) ; THT
+  wt= fichier1->WT(1:kmax+1,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; WT
+  vt= fichier1->VT(1:kmax,jphext:jmax+jphext-1+1,jphext:imax+jphext-1); VT
+  ut= fichier1->UT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1+1) ; UT
+  tht= fichier1->THT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; THT
   tht@long_name="Potential Temperature"
   tht@units="K"
   tht@lat2d = lat2d
   tht@lon2d = lon2d
 
-  lsthm= fichier1->LSTHM(1:kmax,1:jmax,1:imax) ;LSTHM
+  lsthm= fichier1->LSTHM(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ;LSTHM
   lsthm@long_name="Large SCale Potential Temperature"
   lsthm@units="K"
   lsthm@lat2d = lat2d
   lsthm@lon2d = lon2d
 
-  lsvm= fichier1->LSVM(1:kmax,1:jmax+1,1:imax) ; LSVM
+  lsvm= fichier1->LSVM(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; LSVM
   lsvm@long_name="Large SCale Merdian Wind"
   lsvm@units="m/s"
   lsvm@lat2d = lat2d
   lsvm@lon2d = lon2d
 
-  pabst= fichier1->PABST(1:kmax,1:jmax,1:imax) ; PABST
+  pabst= fichier1->PABST(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; PABST
   pabst@long_name="Pressure"
   pabst@units="Pa"
   pabst@lat2d = lat2d

diff --git a/MY_RUN/KTEST/004_Reunion/006_ncl/run_ncl b/MY_RUN/KTEST/004_Reunion/006_ncl/run_ncl
index 74e2d43..71d2cbb 100755 (executable)
--- a/MY_RUN/KTEST/004_Reunion/006_ncl/run_ncl
+++ b/MY_RUN/KTEST/004_Reunion/006_ncl/run_ncl
@@ -6,3 +6,10 @@ set -x
 set -e
 ln -sf ../003_mesonh/REUNI.1.00A20.004.nc4 .
 ncl plot_Reunion.ncl
+display visu_Reunion.000001.png
+display visu_Reunion.000002.png
+display visu_Reunion.000003.png
+display visu_Reunion.000004.png
+display visu_Reunion.000005.png
+display visu_Reunion.000006.png
+display visu_Reunion.000007.png

diff --git a/MY_RUN/KTEST/007_16janvier/011_ncl/plot_16j.ncl b/MY_RUN/KTEST/007_16janvier/011_ncl/plot_16j.ncl
index 2e2f0ac..fe7f5e8 100644 (file)
--- a/MY_RUN/KTEST/007_16janvier/011_ncl/plot_16j.ncl
+++ b/MY_RUN/KTEST/007_16janvier/011_ncl/plot_16j.ncl
@@ -13,23 +13,25 @@ begin
 ;==================================================;
 ; Open the workstation
 ;==================================================;
-  type = "x11"
+  type = "png"
   wks = gsn_open_wks(type,"visu_16j")
 ;=================================================;
 ; Get informations on variable sizes
 ; dims are dims-2 to remove non-physical values
 ;=================================================;
-  mdims = getfilevardimsizes(fichier1,"UT") ; get dimension sizes
+  jphext  = fichier1->JPHEXT
+  mdims = getfilevardimsizes(fichier1,"UT") 
   nd = dimsizes(mdims)
-  imax=mdims(nd-1)-2
-  jmax=mdims(nd-2)-2
+  imax=mdims(nd-1)-2*jphext
+  jmax=mdims(nd-2)-2*jphext
   kmax=mdims(nd-3)-2
 
+
 ;=================================================;
 ; Set map projection
 ;=================================================;
-    lat2d=fichier1->LAT(1:jmax,1:imax)
-    lon2d=fichier1->LON(1:jmax,1:imax)
+    lat2d=fichier1->LAT(jphext:jmax+jphext-1,jphext:imax+jphext-1)
+    lon2d=fichier1->LON(jphext:jmax+jphext-1,jphext:imax+jphext-1)
 ; Resources for the map projection
 ;-----------------------------------------------;
   resmap=True
@@ -101,18 +103,18 @@ BETA = fichier1->BETA
 ;=================================================;
 ; lecture des différents champs
 ;=================================================;
-zs  = fichier1->ZS(1:jmax,1:imax) ; ZS
+zs  = fichier1->ZS(jphext:jmax+jphext-1,jphext:imax+jphext-1) ; ZS
 zs@long_name="Orography"
 zs@units="m"
 zs@lat2d = lat2d
 zs@lon2d = lon2d
 
 
-wt= fichier1->WT(1:kmax+1,1:jmax,1:imax) ; WT
-vt= fichier1->VT(1:kmax,1:jmax+1,1:imax) ; VT
-ut= fichier1->UT(1:kmax,1:jmax,1:imax+1) ; UT
+wt= fichier1->WT(1:kmax+1,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; WT
+vt= fichier1->VT(1:kmax,jphext:jmax+jphext-1+1,jphext:imax+jphext-1) ; VT
+ut= fichier1->UT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1+1) ; UT
 
-tht1= fichier1->THT(1:kmax,1:jmax,1:imax) ; THT
+tht1= fichier1->THT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; THT
 tht1@long_name="Potential Temperature"
 tht1@units="K"
 tht1@lat2d = lat2d
@@ -120,13 +122,13 @@ tht1@lon2d = lon2d
 
 
 
-pabst1= fichier1->PABST(1:kmax,1:jmax,1:imax) ; PABST
+pabst1= fichier1->PABST(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; PABST
 pabst1@long_name="Pressure"
 pabst1@units="Pa"
 pabst1@lat2d = lat2d
 pabst1@lon2d = lon2d
 
-rvt1= fichier1->RVT(1:kmax,1:jmax,1:imax) ; RVT
+rvt1= fichier1->RVT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; RVT
 rvt1=rvt1*1000
 rvt1@long_name="Vapor mixing ratio"
 rvt1@units="kg/kg"

diff --git a/MY_RUN/KTEST/007_16janvier/011_ncl/plot_16j_2.ncl b/MY_RUN/KTEST/007_16janvier/011_ncl/plot_16j_2.ncl
index cc7d858..ee22005 100644 (file)
--- a/MY_RUN/KTEST/007_16janvier/011_ncl/plot_16j_2.ncl
+++ b/MY_RUN/KTEST/007_16janvier/011_ncl/plot_16j_2.ncl
@@ -13,23 +13,24 @@ begin
 ;==================================================;
 ; Open the workstation
 ;==================================================;
-  type = "x11"
+  type = "png"
   wks = gsn_open_wks(type,"visu_16j_2")
 ;=================================================;
 ; Get informations on variable sizes
 ; dims are dims-2 to remove non-physical values
 ;=================================================;
-  mdims = getfilevardimsizes(fichier1,"UT") ; get dimension sizes
+  jphext  = fichier1->JPHEXT
+  mdims = getfilevardimsizes(fichier1,"UT") 
   nd = dimsizes(mdims)
-  imax=mdims(nd-1)-2
-  jmax=mdims(nd-2)-2
+  imax=mdims(nd-1)-2*jphext
+  jmax=mdims(nd-2)-2*jphext
   kmax=mdims(nd-3)-2
 
 ;=================================================;
 ; Set map projection
 ;=================================================;
-    lat2d=fichier1->LAT(1:jmax,1:imax)
-    lon2d=fichier1->LON(1:jmax,1:imax)
+    lat2d=fichier1->LAT(jphext:jmax+jphext-1,jphext:imax+jphext-1)
+    lon2d=fichier1->LON(jphext:jmax+jphext-1,jphext:imax+jphext-1)
 ; Resources for the map projection
 ;-----------------------------------------------;
   resmap=True
@@ -101,18 +102,18 @@ BETA = fichier1->BETA
 ;=================================================;
 ; lecture des différents champs
 ;=================================================;
-zs  = fichier1->ZS(1:jmax,1:imax) ; ZS
+zs  = fichier1->ZS(jphext:jmax+jphext-1,jphext:imax+jphext-1) ; ZS
 zs@long_name="Orography"
 zs@units="m"
 zs@lat2d = lat2d
 zs@lon2d = lon2d
 
 
-wt= fichier1->WT(1:kmax+1,1:jmax,1:imax) ; WT
-vt= fichier1->VT(1:kmax,1:jmax+1,1:imax) ; VT
-ut= fichier1->UT(1:kmax,1:jmax,1:imax+1) ; UT
+wt= fichier1->WT(1:kmax+1,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; WT
+vt= fichier1->VT(1:kmax,jphext:jmax+jphext-1+1,jphext:imax+jphext-1) ; VT
+ut= fichier1->UT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1+1) ; UT
 
-tht1= fichier1->THT(1:kmax,1:jmax,1:imax) ; THT
+tht1= fichier1->THT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; THT
 tht1@long_name="Potential Temperature"
 tht1@units="K"
 tht1@lat2d = lat2d
@@ -120,13 +121,13 @@ tht1@lon2d = lon2d
 
 
 
-pabst1= fichier1->PABST(1:kmax,1:jmax,1:imax) ; PABST
+pabst1= fichier1->PABST(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; PABST
 pabst1@long_name="Pressure"
 pabst1@units="Pa"
 pabst1@lat2d = lat2d
 pabst1@lon2d = lon2d
 
-rvt1= fichier1->RVT(1:kmax,1:jmax,1:imax) ; RVT
+rvt1= fichier1->RVT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; RVT
 rvt1=rvt1*1000
 rvt1@long_name="Vapor mixing ratio"
 rvt1@units="kg/kg"

diff --git a/MY_RUN/KTEST/007_16janvier/011_ncl/run_ncl b/MY_RUN/KTEST/007_16janvier/011_ncl/run_ncl
index 837d325..52d8c50 100755 (executable)
--- a/MY_RUN/KTEST/007_16janvier/011_ncl/run_ncl
+++ b/MY_RUN/KTEST/007_16janvier/011_ncl/run_ncl
@@ -2,4 +2,14 @@ set -x
 ln -sf ../008_run2/16JAN.1.12B18.001.nc4 .
 ln -sf ../008_run2/16JAN.2.12B18.001.nc4 .
 ncl plot_16j.ncl
+
+display  visu_16j.000001.png 
+display  visu_16j.000002.png 
+display  visu_16j.000003.png 
+display  visu_16j.000004.png 
+
 ncl plot_16j_2.ncl
+display  visu_16j_2.000001.png 
+display  visu_16j_2.000002.png 
+display  visu_16j_2.000003.png 
+

diff --git a/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/MESONHtools.ncl b/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/MESONHtools.ncl
index 6f810bb..7280ddc 100644 (file)
--- a/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/MESONHtools.ncl
+++ b/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/MESONHtools.ncl
@@ -59,8 +59,9 @@ if(isfilevar(in_file,"RPK")) then
    if(isfilevar(in_file,"IMAX"))\r
        XHAT=in_file->XHAT\r
        YHAT=in_file->YHAT\r
-       IMAX= dimsizes(XHAT)-2\r
-       JMAX= dimsizes(YHAT)-2\r
+       jphext  = in_file->JPHEXT\r
+       IMAX= dimsizes(XHAT)-2*JPHEXT\r
+       JMAX= dimsizes(YHAT)-2*JPHEXT\r
        zdx=XHAT(2)-XHAT(1)\r
        zdy=YHAT(2)-YHAT(1)\r
 \r

diff --git a/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/mnh_BasicMap.ncl b/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/mnh_BasicMap.ncl
index d5bc9da..583550c 100644 (file)
--- a/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/mnh_BasicMap.ncl
+++ b/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/mnh_BasicMap.ncl
@@ -19,10 +19,11 @@ begin
 ; Get information on variable sizes
 ;=================================================;
 
+  jphext  = a->JPHEXT
   mdims = getfilevardimsizes(a,"ZS") ; get some dimension sizes for the file
   nd = dimsizes(mdims)
-  imax=mdims(nd-1)-2  ; -2 : to remove non-physical values
-  jmax=mdims(nd-2)-2  ; -2 : to remove non-physical values
+  imax=mdims(nd-1)-2*jphext  ; -2*jphext : to remove non-physical values
+  jmax=mdims(nd-2)-2*jphext  ; -2*jphext : to remove non-physical values
 
 ;=================================================;
 ; Read the variables 
@@ -31,10 +32,10 @@ begin
 ; Note: do not read first and last value which are non physical values
 ; -------------------------------------
 
-  lat2d=a->LAT(1:jmax,1:imax)
-  lon2d=a->LON(1:jmax,1:imax)
+  lat2d=a->LAT(jphext:jmax+jphext-1,jphext:imax+jphext-1)
+  lon2d=a->LON(jphext:jmax+jphext-1,jphext:imax+jphext-1)
 
-  ZS = a->ZS(1:jmax,1:imax)
+  ZS = a->ZS(jphext:jmax+jphext-1,jphext:imax+jphext-1)
   ZS@long_name="Orography"
   ZS@units="m"
 

diff --git a/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/mnh_Cloud.ncl b/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/mnh_Cloud.ncl
index 7ab2100..2c523d9 100644 (file)
--- a/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/mnh_Cloud.ncl
+++ b/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/mnh_Cloud.ncl
@@ -28,11 +28,11 @@ begin
 ;=================================================;
 ; Get informations on variable sizes
 ;=================================================;
-
+  jphext  = a->JPHEXT
   mdims = getfilevardimsizes(a,"UT") ; get some dimension sizes for the file
   nd = dimsizes(mdims)
-  imax=mdims(nd-1)-2
-  jmax=mdims(nd-2)-2
+  imax=mdims(nd-1)-2*jphext
+  jmax=mdims(nd-2)-2*jphext
   kmax=mdims(nd-3)-2
 ; -2 : to remove non-physical values
 
@@ -42,15 +42,15 @@ begin
 
 ; Read latitude and longitude fields
 ; -----------------------------------------
-  lat2d = a->LAT(1:jmax,1:imax)
+  lat2d = a->LAT(jphext:jmax+jphext-1,jphext:imax+jphext-1)
   lat2d@units="degrees_north"
-  lon2d = a->LON(1:jmax,1:imax)
+  lon2d = a->LON(jphext:jmax+jphext-1,jphext:imax+jphext-1)
   lon2d@units="degrees_east"
 
 ; Read cloud mixing ratio if it exists
 ; -----------------------------------------
     if(isfilevar(a,"RCT"))
-      qc = a->RCT(1:kmax,1:jmax,1:imax)
+      qc = a->RCT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)
       qc = qc*1000.
       qc@units = "g/kg"   
       qc@description="Cloud mixing ratio"
@@ -61,7 +61,7 @@ begin
 ; Read rain mixing ratio if it exists
 ; -----------------------------------------
     if(isfilevar(a,"RRT"))
-      qr = a->RRT(1:kmax,1:jmax,1:imax)
+      qr = a->RRT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)
       qr = qr*1000.
       qr@units = "g/kg"   
       qr@description="Rain mixing ratio"
@@ -72,7 +72,7 @@ begin
 ; Read ice mixing ratio if it exists
 ; -----------------------------------------
     if(isfilevar(a,"RIT"))
-      qi = a->RIT(1:kmax,1:jmax,1:imax)
+      qi = a->RIT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)
       qi = qi*1000.
       qi@units = "g/kg"   
       qi@description="Ice mixing ratio"

diff --git a/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/mnh_CrossSection.ncl b/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/mnh_CrossSection.ncl
index b8b8907..99ea808 100644 (file)
--- a/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/mnh_CrossSection.ncl
+++ b/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/mnh_CrossSection.ncl
@@ -1,5 +1,7 @@
 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl"
 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_csm.ncl"
+load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/contributed.ncl"
+load "$NCARG_ROOT/lib/ncarg/nclscripts/wrf/WRFUserARW.ncl"
 load "MESONHtools.ncl"
 
 begin
@@ -15,9 +17,6 @@ begin
 ; For paper quality plot do not use ncgm or eps
 ;=================================================;
   type = "x11"
-;  type = "ps"
-; type = "pdf"
-; type = "ps"
 
 ;=================================================;
 ; Open the workstation and choose colormap
@@ -29,29 +28,30 @@ begin
 ;=================================================;
 ; Get informations on variable sizes
 ;=================================================;
+  jphext  = a->JPHEXT
   mdims = getfilevardimsizes(a,"UT") ; get some dimension sizes for the file
   nd = dimsizes(mdims)
-  imax=mdims(nd-1)-2
-  jmax=mdims(nd-2)-2
+  imax=mdims(nd-1)-2*jphext
+  jmax=mdims(nd-2)-2*jphext
   kmax=mdims(nd-3)-2
 
 ;=================================================;
 ; Read  some variables from mnh_file
 ;=================================================;
-    ZS =a->ZS(1:jmax,1:imax)              
+    ZS =a->ZS(jphext:jmax+jphext-1,jphext:imax+jphext-1)              
 
-    th = a->THT(1:kmax,1:jmax,1:imax)
+    th = a->THT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)
     th@long_name="Potential Temperature"
     th@description="TH"
 
-    um = a->UT(1:kmax,1:jmax,1:imax+1)
+    um = a->UT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1+1)
     um@description="U"
 
     zh= a->ZHAT(0:kmax)
 
-    lat2d = a->LAT(1:jmax,1:imax)
+    lat2d = a->LAT(jphext:jmax+jphext-1,jphext:imax+jphext-1)
     lat2d@units="degrees_north"
-    lon2d = a->LON(1:jmax,1:imax)
+    lon2d = a->LON(jphext:jmax+jphext-1,jphext:imax+jphext-1)
     lon2d@units="degrees_east"
 
     ZS@lat2d=lat2d
@@ -107,8 +107,6 @@ begin
 ;-----------------------------------------------;
   resmap=True
 
-
-
 ;=================================================;
 ; Define Other Resources for map ploting
 ;=================================================;
@@ -126,9 +124,9 @@ begin
 
 ; Defining the corners for projection
 ;====================================
-  resmap@mpLimitMode            = "Corners"
-  resmap@mpLeftCornerLatF       = lat2d(0,0)
-  resmap@mpLeftCornerLonF       = lon2d(0,0)
+  resmap@mpLimitMode           = "Corners"
+  resmap@mpLeftCornerLatF      = lat2d(0,0)
+  resmap@mpLeftCornerLonF      = lon2d(0,0)
   resmap@mpRightCornerLatF     = lat2d(jmax-1,imax-1)
   resmap@mpRightCornerLonF     = lon2d(jmax-1,imax-1)
 
@@ -161,7 +159,7 @@ begin
 ; Define the plane where the cross-section will be done
 ; ------------------------------------------------------
         plane = new(2,float)
-        plane = (/ (mdims(nd-1)-2)/2, (mdims(nd-2)-2)/2 /)    ; pivot point is center of domain (x,y)
+        plane = (/ (imax)/2, (jmax)/2 /)    ; pivot point is center of domain (x,y)
 
 ; Resource for the interpolation
 ; --------------------------------
@@ -313,6 +311,5 @@ begin
 
 end do  ; make next cross section
 
-print(resmap)
 
 end

diff --git a/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/mnh_CrossSection_bis.ncl b/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/mnh_CrossSection_bis.ncl
index 02bdc0e..a6a6ddf 100644 (file)
--- a/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/mnh_CrossSection_bis.ncl
+++ b/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/mnh_CrossSection_bis.ncl
@@ -17,9 +17,6 @@ begin
 ; For paper quality plot do not use ncgm or eps
 ;=================================================;
   type = "x11"
-;  type = "png"
-; type = "pdf"
-; type = "ps"
 
 ;=================================================;
 ; Open the workstation and choose colormap
@@ -30,25 +27,26 @@ begin
 ;=================================================;
 ; Get informations on variable sizes
 ;=================================================;
+  jphext  = a->JPHEXT
   mdims = getfilevardimsizes(a,"UT") ; get some dimension sizes for the file
   nd = dimsizes(mdims)
-  imax=mdims(nd-1)-2
-  jmax=mdims(nd-2)-2
+  imax=mdims(nd-1)-2*jphext
+  jmax=mdims(nd-2)-2*jphext
   kmax=mdims(nd-3)-2
 
 ;=================================================;
 ; Read  some variables from mnh_file
 ;=================================================;
-    lat2d=a->LAT(1:jmax,1:imax)
+    lat2d = a->LAT(jphext:jmax+jphext-1,jphext:imax+jphext-1)
     lat2d@units="degrees_north"
-    lon2d=a->LON(1:jmax,1:imax)
+    lon2d = a->LON(jphext:jmax+jphext-1,jphext:imax+jphext-1)
     lon2d@units="degrees_east"
 
-    ZS =a->ZS(1:jmax,1:imax)              
+    ZS =a->ZS(jphext:jmax+jphext-1,jphext:imax+jphext-1)              
     ZS@lat2d = lat2d
     ZS@lon2d = lon2d
 
-    rv = a->RVT(1:kmax,1:jmax,1:imax)
+    rv = a->RVT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)
     rv = rv*1000.
     rv@description="RVT"
     rv@lat2d = lat2d
@@ -216,9 +214,7 @@ begin
 ; Define the plane where the cross-section will be done
 ; ------------------------------------------------------
         plane = new(2,float)
-        ;plane = (/ (mdims(nd-1)-2)/2, (mdims(nd-2)-2)/2 /)    ; pivot point is center of domain (x,y)
-        plane = (/ ((mdims(nd-1)-2)/2)+10, (mdims(nd-2)-2)/2 /)    ; pivot point is center of domain (x,y)
-
+        plane = (/ (imax/2)+10, (jmax)/2 /)    
 ; Resource for the interpolation
 ; --------------------------------
         opts = False

diff --git a/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/mnh_ModelLevels.ncl b/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/mnh_ModelLevels.ncl
index fabab8f..030d04d 100644 (file)
--- a/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/mnh_ModelLevels.ncl
+++ b/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/mnh_ModelLevels.ncl
@@ -1,4 +1,6 @@
 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl"
+load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/contributed.ncl"
+load "$NCARG_ROOT/lib/ncarg/nclscripts/wrf/WRFUserARW.ncl"
 load "MESONHtools.ncl"
 
 ;=============================================================;
@@ -29,40 +31,41 @@ begin
 ; Get informations on variable sizes
 ; dims are dims-2 to remove non-physical values
 ;=================================================;
+  jphext  = a->JPHEXT
   mdims = getfilevardimsizes(a,"THT") ; get dimension sizes
   nd = dimsizes(mdims)
-  imax=mdims(nd-1)-2
-  jmax=mdims(nd-2)-2
+  imax=mdims(nd-1)-2*jphext
+  jmax=mdims(nd-2)-2*jphext
   kmax=mdims(nd-3)-2
 
 ;=================================================;
 ; Read the variables we need
 ;=================================================;
-  lat2d = a->LAT(1:jmax,1:imax)
+  lat2d = a->LAT(jphext:jmax+jphext-1,jphext:imax+jphext-1)
   lat2d@units="degrees_north"
-  lon2d = a->LON(1:jmax,1:imax)
+  lon2d = a->LON(jphext:jmax+jphext-1,jphext:imax+jphext-1)
   lon2d@units="degrees_east"
 
-  th  = a->THT(1:kmax,1:jmax,1:imax)   ; theta
+  th  = a->THT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)   ; theta
   th@long_name="Potential Temperature"
   th@units = "K"
   th@lat2d=lat2d
   th@lon2d=lon2d
 
-  qv  = a->RVT(1:kmax,1:jmax,1:imax)   ; Qv
+  qv  = a->RVT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)   ; Qv
   qv = qv*1000.
   qv@long_name="Water vapor mixing ratio"
   qv@units = "g/kg"
   qv@lat2d=lat2d
   qv@lon2d=lon2d
 
-  ut   = a->UT(1:kmax,1:jmax,1:imax+1)        ; u
+  ut   = a->UT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1+1)        ; u
   ut@long_name="U"
   ut@units="m/s"
   ut@lat2d=lat2d
   ut@lon2d=lon2d
 
-  vt   = a->VT(1:kmax,1:jmax+1,1:imax)        ; v
+  vt   = a->VT(1:kmax,jphext:jmax+jphext-1+1,jphext:imax+jphext-1)        ; v
   vt@long_name="V"
   vt@units="m/s"
   vt@lat2d=lat2d

diff --git a/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/mnh_PressureLevel.ncl b/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/mnh_PressureLevel.ncl
index 0e9e9c0..78edc59 100644 (file)
--- a/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/mnh_PressureLevel.ncl
+++ b/MY_RUN/KTEST/007_16janvier/011_ncl_nc4/mnh_PressureLevel.ncl
@@ -37,11 +37,11 @@ begin
 ; Get informations on variable sizes
 ; dims are dims-2 to remove non-physical values
 ;=================================================;
-;print("Reading dims")
+  jphext  = a->JPHEXT
   mdims = getfilevardimsizes(a,"UT") ; get dimension sizes
   nd = dimsizes(mdims)
-  imax=mdims(nd-1)-2
-  jmax=mdims(nd-2)-2
+  imax=mdims(nd-1)-2*jphext
+  jmax=mdims(nd-2)-2*jphext
   kmax=mdims(nd-3)-2
 
 
@@ -49,13 +49,12 @@ begin
 ; Read the variables we need
 ;=================================================;
 
-;  print("Reading THT")
-  tk = a->THT(1:kmax,1:jmax,1:imax)         ; potential temperature
+  tk = a->THT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)             ; potential temperature
   tk@description="Potential Temperature"
 
-;  print("Reading wind")
-  u = a->UT(1:kmax,1:jmax,1:imax+1)         ; u
-  v = a->VT(1:kmax,1:jmax+1,1:imax)         ; v
+  u = a->UT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1+1)         ; u
+  v = a->VT(1:kmax,jphext:jmax+jphext-1+1,jphext:imax+jphext-1)         ; v
+
 
 ; Unstagger u,v
   u!0="Z"
@@ -68,17 +67,14 @@ begin
   v!2="X"
   v_unst = wrf_user_unstagger(v,"Y")
 
-;  print("Reading pressure")
-  p = a->PABST(1:kmax,1:jmax,1:imax)        ; pressure
+  p = a->PABST(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)        ; pressure
   p@description="Pressure"
 
-;  print("Reading water vapor mixing ratio")
-  rv = a->RVT(1:kmax,1:jmax,1:imax)    ; water vapor mixing ratio
+  rv = a->RVT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)    ; water vapor mixing ratio
   rv = rv*1000.    ; water vapor mixing ratio
   rv@description="Water vapor mixing ratio"
 
-;  print("Reading orography")
-  zs = a->ZS(1:jmax,1:imax)                ; terrain
+  zs = a->ZS(jphext:jmax+jphext-1,jphext:imax+jphext-1)                    ; terrain
   zh = a->ZHAT(1:kmax+1)                   ; heigth without terrain
 
 ;==========================================

diff --git a/MY_RUN/KTEST/009_ICARTT/006_ncl/plot_ICARTT.ncl b/MY_RUN/KTEST/009_ICARTT/006_ncl/plot_ICARTT.ncl
index 4c7a999..c9d3c2f 100644 (file)
--- a/MY_RUN/KTEST/009_ICARTT/006_ncl/plot_ICARTT.ncl
+++ b/MY_RUN/KTEST/009_ICARTT/006_ncl/plot_ICARTT.ncl
@@ -15,21 +15,22 @@ begin
 ; Get informations on variable sizes\r
 ; dims are dims-2 to remove non-physical values\r
 ;=================================================;\r
-  mdims = getfilevardimsizes(a,"THT") ; get dimension sizes\r
+  jphext  = a->JPHEXT\r
+  mdims = getfilevardimsizes(a,"UT") \r
   nd = dimsizes(mdims)\r
-  imax=mdims(nd-1)-2\r
-  jmax=mdims(nd-2)-2\r
+  imax=mdims(nd-1)-2*jphext\r
+  jmax=mdims(nd-2)-2*jphext\r
   kmax=mdims(nd-3)-2\r
 \r
 ;-------------------------------------------------;\r
 ; Read data.\r
 ;-------------------------------------------------;\r
-  lat2d = a->LAT(1:jmax,1:imax)\r
+  lat2d = a->LAT(jphext:jmax+jphext-1,jphext:imax+jphext-1)\r
   lat2d@units="degrees_north"\r
-  lon2d = a->LON(1:jmax,1:imax)\r
+  lon2d = a->LON(jphext:jmax+jphext-1,jphext:imax+jphext-1)\r
   lon2d@units="degrees_east"\r
 \r
-zs  = a->ZS(1:jmax,1:imax) ; ZS\r
+zs  = a->ZS(jphext:jmax+jphext-1,jphext:imax+jphext-1) ; ZS\r
 zs@long_name="Orography"\r
 zs@units="m"\r
 zs@lat2d = lat2d\r
@@ -37,7 +38,7 @@ zs@lon2d = lon2d
 \r
 printMinMax(zs,0)\r
 \r
-  rc_t1 = a->RCT(1:kmax,1:jmax,1:imax)*1.e3\r
+  rc_t1 = a->RCT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)*1.e3\r
   rc_t1@long_name="Cloud mixing ratio"\r
   rc_t1@units="g/kg"\r
   rc_t1@lat2d=lat2d\r
@@ -45,35 +46,35 @@ printMinMax(zs,0)
 printMinMax(rc_t1,0)\r
 \r
 ;\r
-  o3_t1 = a->O3T(1:kmax,1:jmax,1:imax)*1.e9\r
+  o3_t1 = a->O3T(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)*1.e9\r
   o3_t1@long_name="Ozone"\r
   o3_t1@units="ppbv"\r
   o3_t1@lat2d=lat2d\r
   o3_t1@lon2d=lon2d\r
 \r
 ;\r
-  co_t1 = a->COT(1:kmax,1:jmax,1:imax)*1.e9\r
+  co_t1 = a->COT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)*1.e9\r
   co_t1@long_name="carbon monoxide"\r
   co_t1@units="ppbv"\r
   co_t1@lat2d=lat2d\r
   co_t1@lon2d=lon2d\r
 ;\r
 ;\r
-  rc_t2 = a2->RCT(1:kmax,1:jmax,1:imax)*1.e3\r
+  rc_t2 = a2->RCT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)*1.e3\r
   rc_t2@long_name="Cloud mixing ratio"\r
   rc_t2@units="g/kg"\r
   rc_t2@lat2d=lat2d\r
   rc_t2@lon2d=lon2d\r
 \r
 ;\r
-  o3_t2 = a2->O3T(1:kmax,1:jmax,1:imax)*1.e9\r
+  o3_t2 = a2->O3T(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)*1.e9\r
   o3_t2@long_name="Ozone"\r
   o3_t2@units="ppbv"\r
   o3_t2@lat2d=lat2d\r
   o3_t2@lon2d=lon2d\r
 \r
 ;\r
-  co_t2 = a2->COT(1:kmax,1:jmax,1:imax)*1.e9\r
+  co_t2 = a2->COT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)*1.e9\r
   co_t2@long_name="carbon monoxide"\r
   co_t2@units="ppbv"\r
   co_t2@lat2d=lat2d\r
@@ -193,7 +194,7 @@ o3_t2_plane = wrf_user_intrp3d(o3_t2,alt,"h",1250,0.,False)
 \r
 \r
   figname ="zsection_1250"\r
-  wks  = gsn_open_wks("ps",figname)   ; open a ncgm file\r
+  wks  = gsn_open_wks("png",figname)   ; open a ncgm file\r
   gsn_define_colormap(wks,"WhBlGrYeRe") ; Choose colormap\r
 \r
   res                 = resmap          \r

diff --git a/MY_RUN/KTEST/009_ICARTT/006_ncl/run_ncl b/MY_RUN/KTEST/009_ICARTT/006_ncl/run_ncl
index 09f1e79..6e564c1 100755 (executable)
--- a/MY_RUN/KTEST/009_ICARTT/006_ncl/run_ncl
+++ b/MY_RUN/KTEST/009_ICARTT/006_ncl/run_ncl
@@ -8,5 +8,12 @@ set -e
 ln -sf ../003_mesonh/ICART.1.SEG01.001.nc4 .
 ln -sf ../003_mesonh/ICART.1.SEG01.002.nc4 .
 
-rm -f *.ps 
+rm -f *.png 
 ncl plot_ICARTT.ncl
+
+display zsection_1250.000001.png
+display zsection_1250.000002.png
+display zsection_1250.000003.png
+display zsection_1250.000004.png
+display zsection_1250.000005.png
+display zsection_1250.000006.png

diff --git a/MY_RUN/KTEST/011_KW78CHEM/005_ncl/plot_KW78_chem.ncl b/MY_RUN/KTEST/011_KW78CHEM/005_ncl/plot_KW78_chem.ncl
index fbe8553..52b4ef0 100644 (file)
--- a/MY_RUN/KTEST/011_KW78CHEM/005_ncl/plot_KW78_chem.ncl
+++ b/MY_RUN/KTEST/011_KW78CHEM/005_ncl/plot_KW78_chem.ncl
@@ -1,8 +1,8 @@
 ;================================================;
 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl"   
-load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_csm.ncl" 
-load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/contributed.ncl"
-load "$NCARG_ROOT/lib/ncarg/nclscripts/wrf/WRFUserARW.ncl"  
+load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_csm.ncl"  
+  load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/contributed.ncl"
+  load "$NCARG_ROOT/lib/ncarg/nclscripts/wrf/WRFUserARW.ncl" 
 ; ================================================;
 ;================================================;
 begin
@@ -13,114 +13,114 @@ begin
 ;==================================================;
 ; Open the workstation
 ;==================================================;
-  type = "ps"
-  ;type = "x11"
+  type = "png"
   wks = gsn_open_wks(type,"visu_KW78_chem")
 ;=================================================;
 ; Get informations on variable sizes
 ; dims are dims-2 to remove non-physical values
 ;=================================================;
+  jphext  = fichier1->JPHEXT
   mdims = getfilevardimsizes(fichier1,"UT") ; get dimension sizes
   nd = dimsizes(mdims)
-  imax=mdims(nd-1)-2
-  jmax=mdims(nd-2)-2
+  imax=mdims(nd-1)-2*jphext
+  jmax=mdims(nd-2)-2*jphext
   kmax=mdims(nd-3)-2
 ;=================================================;
 ; lecture des différents champs
 ;=================================================;
-zs  = fichier1->ZS(1:jmax,1:imax) ; ZS
+zs  = fichier1->ZS(jphext:jmax+jphext-1,jphext:imax+jphext-1) ; ZS
 zhat  = fichier1->ZHAT(1:kmax+1) ; ZHAT
-yhat  = fichier1->YHAT(1:jmax+1) ; YHAT
-xhat  = fichier1->XHAT(1:imax+1) ; XHAT
+yhat  = fichier1->YHAT(1:jmax+jphext-1+1) ; YHAT
+xhat  = fichier1->XHAT(1:imax+jphext-1+1) ; XHAT
 
-wt= fichier1->WT(1:kmax+1,1:jmax,1:imax) ; WT
-vt= fichier1->VT(1:kmax,1:jmax+1,1:imax) ; VT
-ut= fichier1->UT(1:kmax,1:jmax,1:imax+1) ; UT
-tht1= fichier1->THT(1:kmax,1:jmax,1:imax) ; THT
+wt= fichier1->WT(1:kmax+1,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; WT
+vt= fichier1->VT(1:kmax,jphext:jmax+jphext-1+1,jphext:imax+jphext-1) ; VT
+ut= fichier1->UT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1+1) ; UT
+tht1= fichier1->THT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; THT
 tht1@long_name="Potential Temperature"
 tht1@units="K"
-lsthm1= fichier1->LSTHM(1:kmax,1:jmax,1:imax) 
-tht1@long_name="Large SCale Potential Temperature"
-tht1@units="K"
+  lsthm1= fichier1->LSTHM(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) 
+lsthm1@long_name="Large SCale Potential Temperature"
+lsthm1@units="K"
 
-pabst1= fichier1->PABST(1:kmax,1:jmax,1:imax) ; PABST
+pabst1= fichier1->PABST(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; PABST
 pabst1@long_name="Pressure"
 pabst1@units="Pa"
-rvt1= fichier1->RVT(1:kmax,1:jmax,1:imax) ; RVT
+rvt1= fichier1->RVT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; RVT
 rvt1@long_name="Vapor mixing ratio"
 rvt1@units="kg/kg"
-rct1= fichier1->RCT(1:kmax,1:jmax,1:imax) ; RCT
+rct1= fichier1->RCT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; RCT
 rct1@long_name="Cloud mixing ratio"
 rct1@units="kg/kg"
-rrt1= fichier1->RRT(1:kmax,1:jmax,1:imax) ; RRT
+rrt1= fichier1->RRT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; RRT
 rrt1@long_name="Rain mixing ratio"
 rrt1@units="kg/kg"
-rst1= fichier1->RST(1:kmax,1:jmax,1:imax) ; RRT
+rst1= fichier1->RST(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; RRT
 rst1@long_name="Snow mixing ratio"
 rst1@units="kg/kg"
-rgt1= fichier1->RGT(1:kmax,1:jmax,1:imax) ; RRT
+rgt1= fichier1->RGT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; RRT
 rgt1@long_name="Graupel mixing ratio"
 rgt1@units="kg/kg"
 
-inprr= fichier1->INPRR(1:jmax,1:imax) 
+inprr= fichier1->INPRR(jphext:jmax+jphext-1,jphext:imax+jphext-1) 
 inprr@long_name="Instantaneous Precipitation Rain Rate"
 inprr@units="mm/h"
-acprr= fichier1->ACPRR(1:jmax,1:imax) 
+acprr= fichier1->ACPRR(jphext:jmax+jphext-1,jphext:imax+jphext-1) 
 acprr@long_name="Accumulated Precipitation Rain Rate"
 acprr@units="mm"
 
 
-cot1= fichier1->COT(1:kmax,1:jmax,1:imax) ; COT
+cot1= fichier1->COT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; COT
 cot1@long_name="carbon monoxide"
 cot1@units="ppp"
-o3t1= fichier1->O3T(1:kmax,1:jmax,1:imax) ; O3T
+o3t1= fichier1->O3T(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; O3T
 o3t1@long_name="Ozone"
 o3t1@units="ppp"
 
-hchot1= fichier1->HCHOT(1:kmax,1:jmax,1:imax) ; HCHOT
+hchot1= fichier1->HCHOT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; HCHOT
 hchot1@long_name="HCHO"
 hchot1@units="ppp"
-wc_hchot1= fichier1->WC_HCHOT(1:kmax,1:jmax,1:imax) 
+wc_hchot1= fichier1->WC_HCHOT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) 
 wc_hchot1@long_name="WC_HCHO"
 wc_hchot1@units="ppp"
-wr_hchot1= fichier1->WR_HCHOT(1:kmax,1:jmax,1:imax)
+wr_hchot1= fichier1->WR_HCHOT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)
 wr_hchot1@long_name="WR_HCHO"
 wr_hchot1@units="ppp"
-ic_hchot1= fichier1->IC_HCHOT(1:kmax,1:jmax,1:imax)
+ic_hchot1= fichier1->IC_HCHOT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)
 ic_hchot1@long_name="IC_HCHO"
 ic_hchot1@units="ppp"
 
-so2t1= fichier1->SO2T(1:kmax,1:jmax,1:imax) ; SO2T
+so2t1= fichier1->SO2T(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; SO2T
 so2t1@long_name="SO2"
 so2t1@units="ppp"
-wc_so2t1= fichier1->WC_SO2T(1:kmax,1:jmax,1:imax) 
+wc_so2t1= fichier1->WC_SO2T(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) 
 wc_so2t1@long_name="WC_SO2"
 wc_so2t1@units="ppp"
-wr_so2t1= fichier1->WR_SO2T(1:kmax,1:jmax,1:imax)
+wr_so2t1= fichier1->WR_SO2T(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)
 wr_so2t1@long_name="WR_SO2"
 wr_so2t1@units="ppp"
-ic_so2t1= fichier1->IC_SO2T(1:kmax,1:jmax,1:imax)
+ic_so2t1= fichier1->IC_SO2T(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)
 ic_so2t1@long_name="IC_SO2"
 ic_so2t1@units="ppp"
 
-hno3t1= fichier1->HNO3T(1:kmax,1:jmax,1:imax) ; HNO3T
+hno3t1= fichier1->HNO3T(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; HNO3T
 hno3t1@long_name="HNO3"
 hno3t1@units="ppp"
-wc_hno3t1= fichier1->WC_HNO3T(1:kmax,1:jmax,1:imax) 
+wc_hno3t1= fichier1->WC_HNO3T(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) 
 wc_hno3t1@long_name="WC_HNO3"
 wc_hno3t1@units="ppp"
-wr_hno3t1= fichier1->WR_HNO3T(1:kmax,1:jmax,1:imax)
+wr_hno3t1= fichier1->WR_HNO3T(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)
 wr_hno3t1@long_name="WR_HNO3"
 wr_hno3t1@units="ppp"
-ic_hno3t1= fichier1->IC_HNO3T(1:kmax,1:jmax,1:imax)
+ic_hno3t1= fichier1->IC_HNO3T(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)
 ic_hno3t1@long_name="IC_HNO3"
 ic_hno3t1@units="ppp"
 
-phc1= fichier1->PHC(1:kmax,1:jmax,1:imax) 
+phc1= fichier1->PHC(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) 
 phc1@long_name="PHC"
 phc1@units=" "
 
-phr1= fichier1->PHR(1:kmax,1:jmax,1:imax)  
+phr1= fichier1->PHR(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)  
 phr1@long_name="PHR"
 phr1@units=" "
 

diff --git a/MY_RUN/KTEST/011_KW78CHEM/005_ncl/run_ncl b/MY_RUN/KTEST/011_KW78CHEM/005_ncl/run_ncl
index e3dccfb..93de66c 100755 (executable)
--- a/MY_RUN/KTEST/011_KW78CHEM/005_ncl/run_ncl
+++ b/MY_RUN/KTEST/011_KW78CHEM/005_ncl/run_ncl
@@ -7,3 +7,7 @@ set -e
 ln -sf ../002_mesonh/KWRAI.1.SEGCH.004.nc4 .
 
 ncl  plot_KW78_chem.ncl
+for ECH in '000001' '000002' '000003' '000004' '000005' '000006' '000007' '000008' '000009' '000010' '000011' '000012' '000013' '000014' '000015' '000016' '000017' '000018' '000019' '000020' '000021' '000022' '000023' '000024' '000025' '000026' '000027'
+do
+display visu_KW78_chem.${ECH}.png
+done

diff --git a/MY_RUN/KTEST/012_dust/007_ncl/plot_dust.ncl b/MY_RUN/KTEST/012_dust/007_ncl/plot_dust.ncl
index 36bbac6..d0669e4 100644 (file)
--- a/MY_RUN/KTEST/012_dust/007_ncl/plot_dust.ncl
+++ b/MY_RUN/KTEST/012_dust/007_ncl/plot_dust.ncl
@@ -1,6 +1,8 @@
 ;================================================;
 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl"   
 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_csm.ncl" 
+load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/contributed.ncl"
+load "$NCARG_ROOT/lib/ncarg/nclscripts/wrf/WRFUserARW.ncl"
 ; ================================================;
 ;================================================;
 begin
@@ -11,23 +13,24 @@ begin
 ;==================================================;
 ; Open the workstation
 ;==================================================;
-  type = "ps"
+  type = "png"
   wks = gsn_open_wks(type,"visu_dust")
 ;=================================================;
 ; Get informations on variable sizes
 ; dims are dims-2 to remove non-physical values
 ;=================================================;
+  jphext  = fichier1->JPHEXT  
   mdims = getfilevardimsizes(fichier1,"UT") ; get dimension sizes
   nd = dimsizes(mdims)
-  imax=mdims(nd-1)-2
-  jmax=mdims(nd-2)-2
+  imax=mdims(nd-1)-2*jphext
+  jmax=mdims(nd-2)-2*jphext
   kmax=mdims(nd-3)-2
 
 ;=================================================;
 ; Set map projection
 ;=================================================;
-    lat2d=fichier1->LAT(1:jmax,1:imax)
-    lon2d=fichier1->LON(1:jmax,1:imax)
+    lat2d=fichier1->LAT(jphext:jmax+jphext-1,jphext:imax+jphext-1)
+    lon2d=fichier1->LON(jphext:jmax+jphext-1,jphext:imax+jphext-1)
 ; Resources for the map projection
 ;-----------------------------------------------;
   resmap=True
@@ -108,11 +111,11 @@ BETA = fichier1->BETA
 ;=================================================;
 ; lecture des différents champs
 ;=================================================;
-wt= fichier1->WT(1:kmax+1,1:jmax,1:imax) ; WT
-vt= fichier1->VT(1:kmax,1:jmax+1,1:imax) ; VT
-ut= fichier1->UT(1:kmax,1:jmax,1:imax+1) ; UT
+wt= fichier1->WT(1:kmax+1,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; WT
+vt= fichier1->VT(1:kmax,jphext:jmax+jphext-1+1,jphext:imax+jphext-1) ; VT
+ut= fichier1->UT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1+1) ; UT
 
-tht= fichier1->THT(1:kmax,1:jmax,1:imax) ; THT
+tht= fichier1->THT(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1) ; THT
 tht@long_name="Potential Temperature"
 tht@units="K"
 tht@lat2d = lat2d
@@ -120,56 +123,56 @@ tht@lon2d = lon2d
 
 
 
-dstm03t= fichier1->DSTM03T(1:kmax,1:jmax,1:imax)
+dstm03t= fichier1->DSTM03T(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)
 dstm03t@long_name="DSTM03T"
 dstm03t@units="ppp"
 dstm03t@lat2d = lat2d
 dstm03t@lon2d = lon2d
 
-dstm33t= fichier1->DSTM33T(1:kmax,1:jmax,1:imax)
+dstm33t= fichier1->DSTM33T(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)
 dstm33t@long_name="DSTM33T"
 dstm33t@units="ppp"
 dstm33t@lat2d = lat2d
 dstm33t@lon2d = lon2d
 
-dstm02t= fichier1->DSTM02T(1:kmax,1:jmax,1:imax)
+dstm02t= fichier1->DSTM02T(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)
 dstm02t@long_name="DSTM02T"
 dstm02t@units="ppp"
 dstm02t@lat2d = lat2d
 dstm02t@lon2d = lon2d
 
-dstm32t= fichier1->DSTM32T(1:kmax,1:jmax,1:imax)
+dstm32t= fichier1->DSTM32T(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)
 dstm32t@long_name="DSTM32T"
 dstm32t@units="ppp"
 dstm32t@lat2d = lat2d
 dstm32t@lon2d = lon2d
 
-dstm01t= fichier1->DSTM01T(1:kmax,1:jmax,1:imax)
+dstm01t= fichier1->DSTM01T(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)
 dstm01t@long_name="DSTM01T"
 dstm01t@units="ppp"
 dstm01t@lat2d = lat2d
 dstm01t@lon2d = lon2d
 
-dstm31t= fichier1->DSTM31T(1:kmax,1:jmax,1:imax)
+dstm31t= fichier1->DSTM31T(1:kmax,jphext:jmax+jphext-1,jphext:imax+jphext-1)
 dstm31t@long_name="DSTM31T"
 dstm31t@units="ppp"
 dstm31t@lat2d = lat2d
 dstm31t@lon2d = lon2d
 
-flx_dst001= fichier1->FLX_DST001(0,1:jmax,1:imax)
+flx_dst001= fichier1->FLX_DST001(jphext:jmax+jphext-1,jphext:imax+jphext-1)
 flx_dst001@long_name="FLX_DST001"
 flx_dst001@units="kg/m2/s"
 flx_dst001@lat2d = lat2d
 flx_dst001@lon2d = lon2d
 
 
-flx_dst002= fichier1->FLX_DST002(0,1:jmax,1:imax)
+flx_dst002= fichier1->FLX_DST002(jphext:jmax+jphext-1,jphext:imax+jphext-1)
 flx_dst002@long_name="FLX_DST002"
 flx_dst002@units="kg/m2/s"
 flx_dst002@lat2d = lat2d
 flx_dst002@lon2d = lon2d
 
-flx_dst003= fichier1->FLX_DST003(0,1:jmax,1:imax)
+flx_dst003= fichier1->FLX_DST003(jphext:jmax+jphext-1,jphext:imax+jphext-1)
 flx_dst003@long_name="FLX_DST003"
 flx_dst003@units="kg/m2/s"
 flx_dst003@lat2d = lat2d

diff --git a/MY_RUN/KTEST/012_dust/007_ncl/run_ncl b/MY_RUN/KTEST/012_dust/007_ncl/run_ncl
index 942dc30..cda94ee 100755 (executable)
--- a/MY_RUN/KTEST/012_dust/007_ncl/run_ncl
+++ b/MY_RUN/KTEST/012_dust/007_ncl/run_ncl
@@ -1,3 +1,11 @@
 set -x
 ln -sf ../004_restart/DUST7.1.SEG02.004.nc4 .
 ncl plot_dust.ncl
+
+for ECH in '000001' '000002' '000003' '000004' '000005' '000006' '000007' '000008' '000009' '000010' '000011' 
+
+
+
+do
+display visu_dust.${ECH}.png
+done